Universality and Shannon entropy of codon usage

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Universality and Shannon entropy of codon usage.

The distribution functions of codon usage probabilities, computed over all the available GenBank data for 40 eukaryotic biological species and five chloroplasts, are best fitted by the sum of a constant, an exponential, and a linear function in the rank of usage. For mitochondria the analysis is not conclusive. These functions are characterized by parameters that strongly depend on the total gu...

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ژورنال

عنوان ژورنال: Physical Review E

سال: 2003

ISSN: 1063-651X,1095-3787

DOI: 10.1103/physreve.68.061910